Research Specialist in Microscopy and Spatial Transcriptomics
Vor 2 Tagen
Your position This position will establish and operate advanced imaging and spatial transcriptomics pipelines for high-resolution molecular profiling in intact tissues. The specialist will develop and apply methods enabling large-volume processing-such as whole brain spatial transcriptomics-and integrate techniques including expansion microscopy and multiplexed FISH.Your responsibilitiesOperate, maintain, and expand commercial and custom-built systems for spatial transcriptomics and microfluidic tissue processing.Develop protocols for volumetric molecular imaging, including expansion microscopy and multiplexed in situ hybridization workflows.Establish whole-mount and thick-section spatial transcriptomics pipelines, ensuring tissue integrity, reproducible labeling, and high-content imaging compatibility.Build or adapt instrumentation required for large-volume sample processing and imaging.Coordinate with researchers, image analysts and data specialists to generate robust, standardized whole-brain datasets.Train and support researchers in applying facility methods to their own samples.Contribute to development of facility infrastructure for long-term whole-tissue profiling. Your profile PhD in neuroscience, bioengineering, biophysics, molecular biology, or related discipline.Expertise in advanced microscopy (light-sheet, confocal, multiphoton).Experience with spatial transcriptomics, expansion microscopy, or multiplexed FISH.Skills in instrumentation, microfluidics, or custom optical systems.Experience with tissue clearing or large fixed tissue preparations advantageous.Strong communication skills, interest in interdisciplinary work, and ability to train students and postdocs.
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Basel, Schweiz myScience VollzeitResearch Specialist in Microscopy and Spatial Transcriptomics (80-100%) University of Basel Workplace Basel - North West Switzerland - Switzerland Category Life Sciences | Physics Position Senior Scientist / Postdoc Published 10 December 2025 Research Specialist in Microscopy and Spatial Transcriptomics (80-100%) Starting April 15, 2026 or as per agreement...
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Basel, Schweiz Universität Basel VollzeitThe Biozentrum of the University of Basel is one of the world's leading life sciences institutes. With 32 groups and 500 employees, we are a dynamic and international research community that has spawned many fundamental discoveries in biology and medicine as well as several Nobel Laureates. The Biozentrum is establishing the Dietschy Facility for Tissue...
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Basel, Basel-Stadt, Schweiz Universität Basel VollzeitThe Biozentrum of the University of Basel is one of the world's leading life sciences institutes. With 32 groups and 500 employees, we are a dynamic and international research community that has spawned many fundamental discoveries in biology and medicine as well as several Nobel Laureates. The Biozentrum is establishing the Dietschy Facility for Tissue...
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Spatial Transcriptomics Scientist
Vor 3 Tagen
Basel, Schweiz Friedrich Miescher Institute VollzeitThe Friedrich Miescher Institute for Biomedical Research (FMI) in Basel, Switzerland is a world-class research institute dedicated to investigating the molecular mechanisms of health and disease in the fields of neurobiology, genome regulation and multicellular systems. FMI research is supported by state-of-the-art core facilities, employing various...
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Basel, Schweiz myScience VollzeitPhD Candidate position on Optical Control over Topological Phases of Matter (ERC Starting Grant) University of Basel Workplace Basel - North West Switzerland - Switzerland Category Physics | Life Sciences Position Junior Researcher / PhD Position Published 10 December 2025 Research Specialist in Microscopy and Spatial Transcriptomics (80-100%) Starting April...
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Basel, Basel-Stadt, Schweiz Universität Basel VollzeitThe Biozentrum of the University of Basel is one of the world's leading life sciences institutes. With 32 groups and 500 employees, we are a dynamic and international research community that has spawned many fundamental discoveries in biology and medicine as well as several Nobel Laureates. The Biozentrum is establishing the Dietschy Facility for Tissue...
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Basel, Schweiz Universität Basel VollzeitThe Biozentrum of the University of Basel is one of the world's leading life sciences institutes. With 32 groups and 500 employees, we are a dynamic and international research community that has spawned many fundamental discoveries in biology and medicine as well as several Nobel Laureates. The Biozentrum is establishing the Dietschy Facility for Tissue...
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Basel, Schweiz Jobs CH VollzeitPhD Candidate position on Optical Control over Topological Phases of Matter (ERC Starting Grant)PhD-Position zur optischen Kontrolle topologischer Phasen in Basel.Aufgaben Entwicklung und Anwendung von Bildgebungsmethoden.Betrieb von Systemen für räumliche Transkriptomik.Zusammenarbeit mit Forschenden zur Datengenerierung.Fähigkeiten PhD in...
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Basel, Schweiz The Biozentrum, University of Basel VollzeitYour position •Maintain and enhance pipelines for spike sorting, calcium imaging signal extraction, neuron tracking across recordings, and automated behavioral analysis.• Develop efficient data storage, compression, and transfer systems suitable for large, long-duration experiments.• Build complete, user-friendly data-analysis workflows from...
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Basel, Schweiz Jobs CH VollzeitPhD Candidate position on Optical Control over Topological Phases of Matter (ERC Starting Grant) PhD-Position zur optischen Kontrolle topologischer Phasen in Basel. Aufgaben Entwicklung und Anwendung von Bildgebungsmethoden. Betrieb von Systemen für räumliche Transkriptomik. Zusammenarbeit mit Forschenden zur Datengenerierung. Fähigkeiten PhD in...
